SNPper - IIPGA PrettyBase Importer Goldenpath: hg16
dbSNP: build 118
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Gene: CCR4
Region searched: chr3:32956630-32978171
Match orientation: Forward
Processing time: 0.41 seconds

SNPs:

Position in
consensus
Absolute
position
Relative
positions
All 1 All 2 All 3 All 4 Minor allele
frequency
Base in
consensus
Known base
(from GoldenPath)
Known SNP
(from dbSNP)
Assigned name
3631 chr3:32965260 -1423 A/G G (87) A (7)     7% G G rs6550178 IIPGA-CCR4-3631
3690 chr3:32965319 -1364 C C (85) X (7)     7% C C IIPGA-CCR4-3690 IIPGA-CCR4-3690
3713 chr3:32965342 -1341 A/G G (93) A (1)     1% G G IIPGA-CCR4-3713 IIPGA-CCR4-3713
4668 chr3:32966297 -386 A/G A (91) G (1)     1% A A IIPGA-CCR4-4668 IIPGA-CCR4-4668
4949 chr3:32966578 -105 A/G A (87) G (7)     7% A A IIPGA-CCR4-4949 IIPGA-CCR4-4949
6067 chr3:32967696 1013 C/T C (79) T (15)     16% C C rs2228428 IIPGA-CCR4-6067
6562 chr3:32968191 1508 C/T C (93) T (1)     1% C C IIPGA-CCR4-6562 IIPGA-CCR4-6562
6648 chr3:32968277 1594 C/T C (78) T (16)     17% C C rs6770096 IIPGA-CCR4-6648
6711 chr3:32968340 1657 C/G C (92) G (2)     2% C C IIPGA-CCR4-6711 IIPGA-CCR4-6711
6901 chr3:32968530 1847 C/T C (93) T (1)     1% C C IIPGA-CCR4-6901 IIPGA-CCR4-6901
6902 chr3:32968531 1848 A/G G (93) A (1)     1% G G IIPGA-CCR4-6902 IIPGA-CCR4-6902
6934 chr3:32968563 1880 A/G A (87) G (7)     7% A A IIPGA-CCR4-6934 IIPGA-CCR4-6934
6974 chr3:32968603 1920 C/T C (87) T (7)     7% C C IIPGA-CCR4-6974 IIPGA-CCR4-6974
© 2001-2004, Alberto Riva, CHIP