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The following information is based on the unmasked version of the consensus sequence. We have also generated data for the masked version of the assembly. There is also an Introduction available if you are looking for a place to get started.

Information
Name myeloid differentiation primary response gene
Source InnateImmunity
Chromosome chr3 (+) (chr3:38155157-38159514)
Accession NM_002468
SNPs 8
Indels 0
Populations 4
Subjects 0
Links [ SNPper ] [ GoldenPath ] [ Gene Image ] [ LocusLink ] [ Omim ] [ PubMed ]
Notes

Of the two SNPs that passed through the genotyping and assay QC process, SNP MYD88_1296, at position 1296 relative to the codon start site, was monomorphic. The remaining SNP, MYD88_4528, is reported under the genotyping results. Certain analysis are absent or should be interpreted accordingly given this single data point

Biological Significance Because the TLRs [ 1, 2, 3, 4, 5, 6, 7, 8, 9 ] share sequence similarity with the IL-1R family in their cytoplasmic regions, it is not unexpected that downstream events are mediated by common components. MyD88 is an adaptor protein that links the IL-1 (α, β) receptor to IRAK, a serine-threonine kinase that is related to the Pelle kinase of Drosophila. Upon binding of ligand to IL-1R, IRAK is phosphorylated, subsequently dissociated from the receptor complex and associates with tumor necrosis factor receptor activated factor 6 (TRAF6). This process results in the activation of two different pathways that involve the c-Jun NH2-terminal kinase (Jnk) and p38 mitogen-activated protein kinase (MAPK) family and the Rel family transcription factor NF-kB. These pathways are evolutionally conserved. MyD88-/- mice do not respond to IL-1, IL-18, LPS or other microbial cell wall components, such as peptidoglycan and lipopeptides, which shows that this molecule is indispensable for responses to these stimuli. However, studies in MyD88-/- macrophages have suggested differences between TLR2 and TLR4 signaling. In MyD88-/- macrophages, production of inflammatory cytokines such as IL-1, TNF-alpha and IL-6 in response to LPS or mycoplasma lipopeptides is completely impaired. Mycoplasma-dependent activation of NF-kB and MAPK, which is mediated by TLR2, is completely abolished in both TLR2-/- and MyD88-/- macrophages. However, LPS activates NF-kB, Jnk or p38 in MyD88-/- macrophages, although this activation is delayed compared to wild-type macrophages. This suggests that there is a MyD88-independent pathway(s) that mediates NF-kB, Jnk or p38 activation after TLR4 signaling. ( See Omim for more ... )
SNP Discovery Data
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Refseq (FASTA)
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African American
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European American
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Hispanic American
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Asthmatic
Association Study Data
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